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Specify observation data

Source: R/EpiSewer.R
sewer_data.Rd

Specify wastewater observation data such as concentration measurements and flows. This is a convenience function to collect all observation data in one object.

Usage

sewer_data(measurements = NULL, flows = NULL, cases = NULL, ...)

Arguments

measurements

A data.frame with measured concentrations of the pathogen of interest. Will be automatically passed to concentrations_observe().

flows

A data.frame with wastewater flow volumes at the sampling site for each day. Will be automatically passed to flows_observe().

cases

A data.frame of case numbers with each row representing one day. Must have at least a column with dates and a column with case numbers. This data is not used for model fitting, but for calibration of the load_per_case assumption. Will be automatically passed to load_per_case_calibrate().

...

Further observations to be passed to EpiSewer().

Value

A list with all observations supplied. Can be passed to the data argument in EpiSewer().